Issues

• Issue with STAR version that produced segmentation faults.

  bug
  nf-core/cageseq#111 · Filter by author limeisoler opened on Jul 10, 2026

• update param names to nf-core style

  enhancement
  nf-core/cageseq#108 · Filter by author ferenckata opened on May 12, 2026

• input modularities

  enhancement
  nf-core/cageseq#104 · Filter by author mashehu opened on Apr 9, 2026 · 2.1.0

• 2.0.0 Documentation

  bug
  nf-core/cageseq#99 · Filter by author mashehu opened on Mar 19, 2026 · 2.0.0

• Check if we can use nf-schema also for folder input

  enhancement
  nf-core/cageseq#97 · Filter by author mashehu opened on Mar 19, 2026 · 2.0.0

• Remove test(_)data directories from repo

  bugenhancement
  nf-core/cageseq#96 · Filter by author mashehu opened on Mar 19, 2026
  1

  

• Migrate local modules to nf-core template

  bug
  nf-core/cageseq#95 · Filter by author mashehu opened on Mar 19, 2026 · 2.0.0
  

• Add nf-test snapshots for the whole pipeline

  bug
  nf-core/cageseq#94 · Filter by author mashehu opened on Mar 19, 2026 · 2.0.0
  

• Check dependencies in rmarkdown container

  nf-core/cageseq#92 · Filter by author mashehu opened on Mar 19, 2026 · 2.0.0
  

• Check dependencies in cageR biocontainer

  nf-core/cageseq#91 · Filter by author mashehu opened on Mar 19, 2026 · 2.0.0