Some command line options might be missing here: https://github.com/nf-core/ncrnannotator/blob/1a57ac306827ace09b52473a1e8f64dcb33c55a5/modules/local/cmsearch/main.nf#L22-L27 potentially `--rfam --cutga`
Some command line options might be missing here:
ncrnannotator/modules/local/cmsearch/main.nf
Lines 22 to 27 in 1a57ac3
potentially
--rfam --cutga