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6 changes: 5 additions & 1 deletion .github/workflows/test_and_deploy.yml
Original file line number Diff line number Diff line change
Expand Up @@ -105,7 +105,11 @@ jobs:
- name: Install build tools
run: |
python -m pip install --upgrade pip
python -m pip install build twine
python -m pip install build twine npe2

- name: Validate plugin
run: |
python -m npe2 validate napari_cellseg3d/napari.yaml

- name: Build package
run: |
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4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -66,9 +66,9 @@ F1-score is computed from the Intersection over Union (IoU) with ground truth la

Read the [article here !](https://elifesciences.org/articles/99848)

### **New version: v0.2.3**
### **New version: v0.2.4**

- v0.2.3:
- v0.2.4:
- Python 3.10-12 support added
- Several fixes to deprecation errors on newer Python versions
- Upgraded packaging to use only pyproject.toml
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22 changes: 11 additions & 11 deletions napari_cellseg3d/napari.yaml
Original file line number Diff line number Diff line change
@@ -1,42 +1,42 @@
name: napari_cellseg3d
name: napari-cellseg3d
display_name: CellSeg3D
schema_version: 0.0.4

contributions:
commands:
- id: napari_cellseg3d.load
- id: napari-cellseg3d.load
title: Create reviewer
python_name: napari_cellseg3d.plugins:Reviewer

- id: napari_cellseg3d.help
- id: napari-cellseg3d.help
title: Create Help
python_name: napari_cellseg3d.plugins:Helper

- id: napari_cellseg3d.utils
- id: napari-cellseg3d.utils
title: Create utilities
python_name: napari_cellseg3d.plugins:Utilities

- id: napari_cellseg3d.infer
- id: napari-cellseg3d.infer
title: Create Inference widget
python_name: napari_cellseg3d.plugins:Inferer

- id: napari_cellseg3d.train
- id: napari-cellseg3d.train
title: Create Trainer widget
python_name: napari_cellseg3d.plugins:Trainer


widgets:
- command: napari_cellseg3d.load
- command: napari-cellseg3d.load
display_name: Labeling

- command: napari_cellseg3d.infer
- command: napari-cellseg3d.infer
display_name: Inference

- command: napari_cellseg3d.train
- command: napari-cellseg3d.train
display_name: Training

- command: napari_cellseg3d.utils
- command: napari-cellseg3d.utils
display_name: Utilities

- command: napari_cellseg3d.help
- command: napari-cellseg3d.help
display_name: Help/About...
4 changes: 2 additions & 2 deletions pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -58,8 +58,8 @@ email = "maxime.vidal@epfl.ch"
[[project.authors]]
name = "Mackenzie Mathis"
email = "mackenzie@post.harvard.edu"
[project.entry-points]
"napari.manifest".napari_cellseg3d = "napari_cellseg3d:napari.yaml"
[project.entry-points."napari.manifest"]
napari-cellseg3d = "napari_cellseg3d:napari.yaml"
[project.optional-dependencies]
crf = [
"pydensecrf2",
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