AI Researcher ๏ฝ Time-Series + Biomedical AI + Quantum ML
Harvard Medical School & BIDMC, ex-OpenAI, ex-MediaTek, ex-Max Planck Institute
Passionate about transforming data into intelligence ๐ง โก๏ธ
- ๐งช Researcher at Harvard Medical School & BIDMC (AI x Surgical Informatics).
- ๐ง Building the EEG Foundation Model for brain signal understanding (AI x EEG x Psychiatry).
- ๐ DeFAI Researcher at Omnis Labs (AI x DeFi x Finance).
- ๐ฑ Currently exploring Quantum Machine Learning, Quant Finance, DeFAI and Brain-Computer Interfaces.
- ๐ Reviewer for ICML, KDD, MICCAI, ICASSP, IEEE TPAMI, TNNLS, and more.
- ๐ Google Scholar ๏ฝ Website
๐ Full list โ Google Scholar ยท Citations recorded on 2026-07-22
| Year | Award |
|---|---|
| 2026 | NVIDIA GTC 2026 โ Top 8 Finalist, GPU-Accelerated Chinese Brain-to-Text Interface (NVIDIA H100) |
| 2026 | Berkeley RDI AgentX-AgentBeats โ 3rd Place in Healthcare Agent (1,300+ teams worldwide) |
| 2023 | 20th National Innovation Award โ Certificate in Clinical Research category |
| 2019 | International Blockchain Olympiad (IBCOL) โ World Finalist (100+ teams) |
| 2017 | Microsoft Imagine Cup โ 2nd Place in Taiwan |
| 2016 | iGEM Competition โ World Gold Medal + Best Applied Design + Best Part Collection + Best Presentation (300+ teams) |
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Res-VMamba
Fine-grained food classification using state space models with deep residual learning. PLoS ONE, 62 citations. -
MUSE EEG
Mind's Eye: EEG-based image recognition using multimodal similarity-keeping contrastive learning. 28 citations. -
QEEGNet
Hybrid quantum-classical encoder model for EEG representation learning. IEEE SiPS 2024, 48 citations. -
QASA
Quantum Adaptive Self-Attention for Quantum Transformer Models. Quantum Sci. Technol. 2026, 23 citations. -
QCL
Quantum Multimodal Contrastive Learning for EEG-image analysis. ICASSP 2025, 18 citations.
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LCM โ Large Cognition Model
Self-supervised EEG foundation model using momentum contrastive learning and masked reconstruction for pretraining on cross-montage EEG data. arXiv, 20 citations.
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FreqLens
Interpretable Frequency Attribution for Time Series Forecasting.
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Necomimi
EEG-to-Image generation using diffusion models with neural cognitive alignment. 13 citations.
- DL-based Eye Tracking System
The new Gaze Heatmap System provides advanced gaze tracking with ETH-XGaze as the default model (best accuracy, supports MPS GPU acceleration). - Webcam Gaze Tracker, Gaze Label Tool & Video Annotation Tool
A web application that uses your webcam to track your eye gaze in real-time, featuring: Gaze-based Image Labeling powered by SAM (Segment Anything Model), Video Annotation Mode for recording gaze and audio commentary on videos. Built with WebGazer.js, ONNX Runtime Web, and Vite. - FewShot3DBrain
Frozen FOMO backbone + task-specific LoRA adapters for sequential few-shot continual learning on tumor segmentation (BraTS) and brain age regression (IXI). - Food2K-TW101
Comprehensive benchmark of fine-grained food classification models on Food2K, Taiwanese Food-101, and Food2K-TW datasets.
- PyTorch Fine-Grained Classification Template PyTorch fine-grained visual classification template implementing multiple architectures (MetaFormer, PRENet, CMAL-Net) for fine-grained image recognition tasks.
- LCM โ Large Cognition Model
- ASR-LLM-Medical Prediction Pipeline
A comprehensive two-stage pipeline for emergency medical service (EMS) call analysis, combining ASR evaluation with LLM enhancement for medical term correction, information extraction, and emergency page generation. [Related]: Firefox Crawler for Broadcastify Audio Archives. - dDTF โ Dynamic Directed Transfer Function
EEG channel connectivity and directionality analysis using dynamic Directed Transfer Function in the frequency domain. - ACTSNet v2 Frequency-Aware Interpretable EEG Classification for TMS antidepressant response prediction.
- ACTSNet v1 Attentional Convolution Time Series Network โ PyTorch implementation from NTU 2021 master's thesis (doi:10.6342/NTU202101201).
- NTQIP NEI-6 Prediction
Decision-tree-based trauma outcome prediction on the TQIP NEI-6 dataset using demographics, GCS, vitals, and injury mechanism features. - TQIP NEI-6 Local Feature Analysis
Local feature engineering and analysis pipeline for TQIP NEI-6 trauma prediction. - Trauma Activation Matcher
Automated matching of trauma activation registry data with EMS audio recordings using time-window, demographics, and injury pattern matching.
- BTSPFormer
Transformer-based time-series model inspired by behavioral-timescale synaptic plasticity (BTSP), designed for predictive learning on damped signals. - DeFi Benchmark on Curve.fi
Predict Curve Pool Virtual Price changes using Random Forest, LSTM, Transformer and QNN (Quantum Neural Network) models. - Curve Pool Intelligent Prediction System Real-time prediction of Curve pool Virtual Price changes, intelligently identifying the best investment opportunities.
- Time-Series Forecasting Benchmark Framework Curated benchmark and evaluation framework for time-series forecasting, aggregating 9+ dataset/model repos (GiftEval, Chronos, UniTS, TFB, BasicTS, etc.).
- Quantum MNIST Diffusion
Quantum-enhanced diffusion models for image generation, bridging medical imaging and quantum computing. - QuantumRWKV
Quantum-Enhanced Channel Mixing in RWKV Models for Time Series Forecasting. - Vision-QRWKV
Vision QRWKV: Exploring Quantum-Enhanced RWKV Models for Image Classification. - QRL for Industry Sector Rotation
QCE25 Quantum Reinforcement Learning agent for industry sector rotation in the stock market. - QML for Text Gen
Quantum text generation using QKSAN, QRWKV, and QASA models with comprehensive evaluation pipeline. - ViQASA โ QASA Vision Transformer
Hybrid classical-quantum Vision Transformer with quantum-inspired attention mechanism using Pennylane, evaluated on MNIST and Fashion-MNIST. - Diffusion QASA
Applying Quantum Adaptive Self-Attention (QASA) to diffusion models. - Quantum Attention
Exploration of quantum attention mechanisms for neural network architectures. - Quantum Molecular Prediction
Quantum and classical regression models (QNN, QASA, Transformer, XGBoost, etc.) for predicting molecular properties. - Multi-Layer FC-VQC Transformer Multi-layer fully-connected Variational Quantum Circuits, ResNet-style VQCs, and Quantum Transformer VQCs for tabular regression and classification benchmarks.
- EEG Dataset Survey Paper
A survey of public EEG datasets for machine learning and BCI. - Psycho Gundam
EEG-based real-time robotic control system using EMOTIV+ and deep learning. - Opensource EEG Dataset
Curated table of open-source EEG datasets with detailed specs (montage, sampling rate, subjects, classes) for ML and BCI research.
- ctext.org Chinese Poem Crawler
For scraping Chinese classical texts from ctext.org. - Chinese BERT Fine-tune
A BERT Chinese model fine-tuning project based on DeepSpeed framework, trained on TMMLU+ multi-domain Chinese Q&A dataset. - Whisper Audio Translate Batch audio transcription pipeline using Whisper (large-v2/v3/turbo) for EMS audio data processing.
- EMS Audio Synthesis Pipeline Synthetic speech generation pipeline for EMS radio call ASR fine-tuning, combining LLM text generation, multi-engine TTS synthesis (XTTS/Bark/Edge), and radio-noise augmentation.
- IELTS Speaking & Writing Practice Full-featured IELTS practice web app with timed recording, local Whisper ASR transcription, automatic band score estimation, pronunciation assessment, and PDF export.
- Python 101 in zh
Simple python tutorial for beginners in Chinese. - PyTorch Medical Image Tutorial
Three deep learning models (VGG16, ResNet18, ViT) on the PathMNIST dataset. - Deep Learning Introduction
A step-by-step PyTorch tutorial for deep learning beginners. - LLM Finetune Tutorial
Comprehensive examples and scripts for fine-tuning LLMs using DeepSpeed, NVIDIA NeMo, and Unsloth. - Soft Prompt VLM Fine-tuning
Tutorial on parameter-efficient fine-tuning of Vision-Language Models using learnable soft prompts (~600K params vs full 124M). - Text-Image Search with CLIP
Text-to-image and image-to-image search system based on CLIP with fine-tuning support and multiple dataset integration. - Laser Physics AI Tutor
RAG-based AI teaching assistant for NYCU laser physics course, featuring 8 learning modes, built with Gemini 2.5 Flash, Supabase pgvector, and Vercel AI SDK. - Kimi-K2 & GPT-OSS Local Install Guide Step-by-step guide for downloading, installing, and running Kimi-K2-Instruct and GPT-OSS (120b/20b) models locally from Hugging Face.
- Solana Demo Tutorial
A basic Solana smart contract demo using Rust and TypeScript, deployed on devnet. - Solana PDA Practice
A simple Solana program that manages user data accounts with messages that can be updated through PDA. - Anchor Solana PDA
A simple Solana program built with the Anchor framework demonstrating the initialization of a Program Derived Address (PDA). - Blockchain from Scratch
A practice project building blockchain systems from the ground up. - ERC Smart Contract Practice Practice project implementing ERC-standard Ethereum smart contracts.
- Uniswap V3 AMM Performance Backtesting System
A backtesting system for Uniswap V3-style AMM performance on Katana L2 chain, using historical event data from the WBTC-USDC pool for backtest analysis. - Quantum vs Classical ML in AMM Trading Strategies
Quantum vs Classical ML in AMM Trading Strategies. - Compass DeFAI DEX AI-driven DEX protocol for DeFAI (Decentralized Finance + AI).
- AMM LP Simulator Interactive AMM liquidity provider simulator with real-time impermanent loss calculation, dual-perspective P&L, compounding fee yield, and farming reward depreciation modeling.
- Project Compass Web3 DeFi AI-based portfolio and risk management platform integrating classical and quantum AI models for portfolio optimization across protocols (LIDO, AAVE, Uniswap, etc.).
- Riverting AI Agent Marketplace with streaming salary on X Layer โ curators upload AI agents and users pay per-second via conversational chat sessions.
- Option Simulator
A mathematical model-based American options backtesting system that simulates option prices using mathematical models rather than relying on historical market data. - Smart Money Concept Demo
Interactive Smart Money Concept (SMC) analysis tool built with Gemini AI and TypeScript. - Curve AI Backend FastAPI backend service for Curve Finance pool metrics syncing, historical APY data tracking, and strategy event management with Celery workers and Prometheus monitoring.
- Aster DEX Trading Bot Flask-based trading bot for Aster DEX, implementing normal grid, logarithmic grid, and volume-based automated trading strategies.
- Omnis CLAMM Vault Case Study Multi-Layer LP strategy backtest with Monte Carlo robustness analysis and interactive dashboard for Steer Protocol vaults on Katana (Ronin L2), comparing 9 strategies.
- Python Crypto Currency Portfolio App
A Python-based cryptocurrency portfolio tracking and analysis application.
- Whaleforce LLM Test
Multi-agent system for financial research and web automation โ a browser-automation agent driven by an explicit
PLAN โ LOCATE โ ACT โ VERIFY โ DIAGNOSEstate machine, a SEC 10-K extractor with layered fallbacks (regex anchors โ structural parsing โ LLM self-consistency), and a 35-agent US-stock analysis suite with deterministic backtesting. Python/FastAPI + Next.js 15, Playwright, Supabase. - flyhypo Agentic pipeline that generates grounded, falsifiable functional hypotheses for Drosophila neuron cell types by fusing connectome structure (neuPrint), literature (PubMed), and LLM reasoning (Gemini), with deterministic verification passes (verbatim quote and connectivity re-checks) to guard against hallucination.
- Paper Evidence Evidence-grounding engine that extracts verbatim quotes from scientific literature and keeps an LLM claim only if the source verifiably supports it โ via quote matching, number-context binding, and cross-model faithfulness checks (Gemini/DeepSeek/Anthropic).
- Bazaar of Fates Eleven traditional divination systems (Western astrology, BaZi, Zi Wei Dou Shu, I Ching, Jyotiแนฃa, etc.) as deterministic calculation engines validated against Swiss Ephemeris, with a FastAPI backend generating bilingual AI-powered readings and a Next.js frontend for chart visualization and synastry analysis.
- Dao-Agent Claude Code Skill that generates structured agent prompts using Taoist ritual metaphors, with 6 template types, multi-agent workflows, prompt linting, and token estimation.
- Shikigami Claude Code Skill inspired by Japanese onmyoji mythology for generating agent prompts, featuring 6 agent templates, 5 multi-agent formations, and composable enhancement modules.
- Moltbook AI Temple Autonomous AI agent on Moltbook social platform simulating a traditional Taiwanese temple, providing Claude-powered fortune telling, divination, and 24/7 automated community engagement.
- EQ Grader Local AI-powered grading system for elementary school EQ worksheets, using Ollama (Qwen 2.5 14B) with a three-stage evaluation pipeline, running entirely on Apple Silicon.
- Paradigm Automated Research Hackathon Solutions for Paradigm's Automated Research Hackathon across four tracks โ including a block-sparse causal attention kernel for NVIDIA H100 (10.63ms), negotiation, market making, and GPU kernel engineering.
- Yao Codec โ ๅ ญ็ป่งฃๅฆ็ฎๆณ Python implementation of the I-Ching six-yao (ๅ ญ็ป) divination decoding algorithm.
- SupplyGraph Official source code for "Optimizing Supply Chain Networks with the Power of Graph Neural Networks" โ GNN-based supply chain network optimization.
- BugCan Pest Counter An IoT project for agricultural pest counting and detection.
- Smart Gloves โ Microsoft Imagine Cup Taiwan 2018 (2nd Place) Wearable smart-glove system from the Microsoft Imagine Cup Taiwan finals.
- IBCOL BlockRental โ IBCOL 2019 World Finalist Blockchain-based rental platform, finalist of the International Blockchain Olympiad 2019.
- iGEM 2016 โ NCTU Formosa (World Gold Medal) Arduino integration code from the 2016 iGEM NCTU Formosa biosensor project (Gold Medal + Best Applied Design + Best Part Collection + Best Presentation).
- makeNTU 2018 โ Glove Control & MeowMeow Gesture-based glove-control hackathon project and its companion build from makeNTU 2018.
- HSPICE Circuit Synthesis HSPICE analog/mixed-signal circuit design and simulation exercises.
- Verilog VLSI Homework Verilog-based VLSI coursework implementations.
- LabVIEW โ Magnetic Hysteresis Image Analysis
LabVIEW implementation of magnetic hysteresis curve image analysis.
- LabVIEW โ Hex Color Plate & Light Memory Game Minor LabVIEW instrumentation/GUI experiments.
- LED Mood Cellphone (Art & Design Final) LED-based mood-indicating cellphone prototype for an art & design course.
- Arduino Agriculture Weather Station & Button-LED Demo Arduino-based weather/environment monitoring node plus a minimal button-LED sample.
- Webduino Blockly agricultural sensor suite: BME280 ยท IR BugCan ยท Rain ยท UV ยท Wind Speed Blockly-based Webduino sensor modules for smart-agriculture deployments.
- Webduino JS sensor framework: sensor.js frame ยท node variants โ BME280 ยท IR BugCan ยท Rain ยท UV ยท Wind Speed JavaScript-based framework and per-sensor node implementations for Webduino.
- ChiShengChen.github.io My primary personal / academic website (chishengchen.github.io).
- academicpages.github.io Academic-style personal site built on the academicpages Jekyll template (forked from mmistakes/minimal-mistakes).
- ms โ Resume Website
Personal resume / online CV website.
- Quantquer Web Company website for ้็ถญ่ณ็งๆ้ๅ ฌๅธ (Quantquer Inc).
- meownote.github.io An earlier personal notes / blog site.
- Rust Learning โ Personal notes and exercises for learning the Rust programming language.
- Python Self-Learning Notes โ Personal Python learning notes and code snippets.
- Deep Learning Self-Learning Notes โ Personal deep learning study notes.
- CSS Flexbox Notes โ Notes and examples on CSS Flexbox layout.
- Sound Analysis Notes โ Code notes from learning sound analysis in the 2018 Fishackathon.
- LaTeX Experiment Report Template โ Reusable LaTeX template for lab / experiment reports.
- MATLAB Auto-Read File โ MATLAB helper for automatically reading and batch-processing files.
- Web Frontend Practice & Web Practice โ Early web front-end practice projects.
- React Native Practice โ React Native mobile development practice project.
- Amazon-style Clone Practice โ E-commerce UI practice project imitating Amazon.
- AR Practice โ Augmented Reality practice project.
- โ๏ธ Email: m50816m50816@gmail.com
- ๐ผ LinkedIn: Michael Chi-Sheng Chen