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Explain the opt-in environment settings, local manifest and expected-results files, invocation, and protected-data handling. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Implement validated, immutable phenotype snapshots in a SQLite sidecar with genetic-index binding, observation mapping, enrichment, cohort selection, diffs, and pair exports. Add GREGoR schemas, synthetic fixtures, integration coverage, and benchmark tooling. Document authorized data acquisition and the phenotype interpretation use case. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
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Summary
Validation
The authorized GREGoR integration test requires locally staged, approved data and was not run.