Monday June the 1st - Friday June the 5th 2026, Institut Pasteur, Paris, France
| ECI track |
| Day 1 |
| Day 2 |
| Day 3 |
| Day 4 |
| Day 5 |
Copy this on your laptop or print it to keep track of what you installaed and downloaded on your computer for the course.
- Day 1
- Fiji
- Installed a fresh version of Fiji
- Downloaded the materials for the Fiji tutorial.
- Fiji
- Day 2
- Ilastik
- Installed Ilastik
- Downloaded the materials for the Ilastik tutorial
- Cellpose
- Subscribed to the Fiji-Cellpose update site in your freshly downloaded Fiji
- Installed Python Miniforge
- Installed Cellpose with mamba
- Icy
- Installed Icy
- Ilastik
- Day 3
- QuPath
- Installed QuPath
- Downloaded the materials for the QuPath tutorial
- QuPath
- Day 4
- BiaPy
- Subscribed to the LOCI update site in your freshly downloaded Fiji
- Downloaded the materials for the BiaPy tutorial
- TrackMate
- Downloaded the materials for the TrackMate tutorial
- BiaPy
- Day 5
- Mélodie AMBROSET - BIBS, UR BIA, INRAE, Nantes, France
- Lenka BACKOVÁ - Image Analysis Hub, C2RI, Institut Pasteur
- Carlos GARCIA-LÒPEZ-DE-HARO - Universidad Carlos III de Madrid
- Robert HAASE - ScaDS.AI Leipzig
- Gaëlle LETORT - Developmental and Stem Cell Biology, Institut Pasteur
- Julie MABON - Biological Image Analysis research unit, Institut Pasteur
- Vannary MEAS-YEDID - Biological Image Analysis research unit, Institut Pasteur
- Thomas MUSSET - Biological Image Analysis research unit, Institut Pasteur
- Jean-Christophe OLIVO-MARIN - Biological Image Analysis research unit, Institut Pasteur
- Thierry PÉCOT - FAIIA, BIOSIT, Université de Rennes
- Minh-Son PHAN - Image Analysis Hub, C2RI, Institut Pasteur
- Stéphane RIGAUD - Image Analysis Hub, C2RI, Institut Pasteur
- Marcela RIVERA - Jacquemet Lab, Turku University
- Jean-Yves TINEVEZ - Image Analysis Hub, C2RI, Institut Pasteur
- Laura XÉNARD - Image Analysis Hub, C2RI, Institut Pasteur
