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23 changes: 23 additions & 0 deletions .github/workflows/validate-zenodo.yaml
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@@ -0,0 +1,23 @@
name: Check zenodo metadata

on:
push:
paths:
- '.zenodo.json'
- '.github/workflows/validate-zenodo.yaml'

jobs:
check-zenodo-metadata:

runs-on: ubuntu-latest

steps:
- uses: actions/checkout@v6
- uses: actions/setup-node@v6
with:
node-version: '24'
- name: Install dependencies
run: npm install zenodraft@0.14.1
- name: Check .zenodo.json file
run: |
npx zenodraft metadata validate .zenodo.json
37 changes: 37 additions & 0 deletions .zenodo.json
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@@ -0,0 +1,37 @@
{
"creators": [
{
"name": "Stevens, Samuel",
"orcid": "https://orcid.org/0009-0000-9493-7766",
"affiliation": "The Ohio State University"
}
],
"description": "saev is a package for training sparse autoencoders (SAEs) on vision transformers (ViTs) in PyTorch.",
"keywords": [
"imageomics",
"sparse autoencoders",
"interpretability",
"computer vision"
],
"title": "saev: Sparse Autoencoders for Vision Transformers",
"version": "0.1.0",
"license": "MIT",
"publication_date": "2026-06-10",
"grants": [
{
"id": "021nxhr62::2118240"
}
],
"related_identifiers": [
{
"identifier": "10.48550/arXiv.2502.06755",
"relation": "isSupplementTo",
"resource_type": "publication-preprint"
},
{
"identifier": "10.48550/arXiv.2511.17735",
"relation": "isSupplementTo",
"resource_type": "publication-preprint"
}
]
}
19 changes: 13 additions & 6 deletions CITATION.cff
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Expand Up @@ -13,8 +13,8 @@ authors:
email: samuel.robert.stevens@gmail.com
orcid: 'https://orcid.org/0009-0000-9493-7766'
affiliation: The Ohio State University
repository-code: 'https://github.com/OSU-NLP-Group/saev'
url: 'https://osu-nlp-group.github.io/saev/'
repository-code: 'https://github.com/Imageomics/saev'
url: 'https://imageomics.github.io/saev/'
repository-artifact: 'https://pypi.org/project/saev/'
abstract: >-
saev is a package for training sparse autoencoders (SAEs)
Expand All @@ -23,7 +23,14 @@ keywords:
- sparse autoencoders
- interpretability
- computer vision
license: CC-BY-4.0
commit: 6a34b6916fda7b04cc2d89749b3ad6425a8f39e6
date-released: '2025-11-16'

license: MIT
date-released: '2026-06-10'
identifiers:
- description: "The GitHub release URL of tag v0.1.0."
type: url
value: "https://github.com/Imageomics/saev/releases/tag/v0.1.0"
- description: "The GitHub URL of the commit tagged with v0.1.0."
type: url
value: "https://github.com/Imageomics/saev/tree/<commit-hash>" # Update on release
version: 0.1.0
#doi: <version-agnostic DOI from Zenodo>
2 changes: 2 additions & 0 deletions LICENSE
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@@ -1,5 +1,7 @@
MIT License

Copyright (c) 2024-2026 Samuel Stevens

Copyright (c) 2023 Joseph Bloom

Permission is hereby granted, free of charge, to any person obtaining a copy
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13 changes: 6 additions & 7 deletions README.md
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Expand Up @@ -2,16 +2,16 @@

![PyPI Downloads](https://static.pepy.tech/badge/saev)
![MIT License](https://img.shields.io/badge/License-MIT-efefef)
![GitHub Repo stars](https://img.shields.io/github/stars/OSU-NLP-group/saev?style=flat&label=GitHub%20%E2%AD%90)
![GitHub Repo stars](https://img.shields.io/github/stars/Imageomics/saev?style=flat&label=GitHub%20%E2%AD%90)

Training sparse autoencoders (SAEs) on vision transformers (ViTs), implemented in PyTorch.

## Docs

- [Docs](https://osu-nlp-group.github.io/saev/api)
- [Colab Notebook for SAE Inference](https://colab.research.google.com/github/OSU-NLP-Group/saev/blob/main/examples/inference.ipynb)
- [User guide](https://osu-nlp-group.github.io/saev/api/users/guide)
- [API reference](https://osu-nlp-group.github.io/saev/api/api/saev/)
- [Docs](https://imageomics.github.io/saev/api)
- [Colab Notebook for SAE Inference](https://colab.research.google.com/github/Imageomics/saev/blob/main/examples/inference.ipynb)
- [User guide](https://imageomics.github.io/saev/api/users/guide)
- [API reference](https://imageomics.github.io/saev/api/api/saev/)

## Research

Expand All @@ -29,10 +29,9 @@ If you want to cite the software, please cite it as:
```bib
@software{stevens2025saev,
author = {Stevens, Samuel},
license = {CC-BY-4.0},
month = apr,
title = {{saev}},
url = {https://github.com/OSU-NLP-Group/saev},
url = {https://github.com/Imageomics/saev},
year = {2025}
}
```
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4 changes: 2 additions & 2 deletions contrib/trait_discovery/CONTRIBUTING.md
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Expand Up @@ -8,7 +8,7 @@ This project aims to use sparse autoencoders (SAEs) on vision transformers like

Sparse autoencoders were recently applied to interpreting large language models by many groups.
[Anthropic's work](https://transformer-circuits.pub/2024/scaling-monosemanticity/index.html) is probably the most well known, but [OpenAI has some work](https://cdn.openai.com/papers/sparse-autoencoders.pdf) and [Google does too](https://arxiv.org/abs/2408.05147).
I have some prior work ([website](https://osu-nlp-group.github.io/saev/), [arxiv](https://arxiv.org/abs/2502.06755)) that shows that sparse autoencoders can also be applied to vision transformer activations and nice-looking qualitative examples are discovered in ViT activations.
I have some prior work ([website](https://imageomics.github.io/saev/), [arxiv](https://arxiv.org/abs/2502.06755)) that shows that sparse autoencoders can also be applied to vision transformer activations and nice-looking qualitative examples are discovered in ViT activations.

**"Interesting and scientifically meaningful"**

Expand Down Expand Up @@ -75,7 +75,7 @@ train_baseline.py
## Environment

```sh
git clone https://github.com/OSU-NLP-Group/saev
git clone https://github.com/Imageomics/saev
git checkout ring-buffer

# Check that saev/ installed okay.
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8 changes: 4 additions & 4 deletions contrib/trait_discovery/scripts/push_dinov3.py
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Expand Up @@ -251,10 +251,10 @@ def make_readme(repo: Repo, staged: list[StagedRun]) -> str:

# SAE for Meta's {repo.title} trained on ImageNet-1K Activations

* **Homepage:** https://osu-nlp-group.github.io/saev
* **Code:** https://github.com/OSU-NLP-Group/saev
* **Homepage:** https://imageomics.github.io/saev
* **Code:** https://github.com/Imageomics/saev
* **Preprint:** https://arxiv.org/abs/2511.17735
* **Demos:** https://osu-nlp-group.github.io/saev#demos
* **Demos:** https://imageomics.github.io/saev#demos
* **Point of Contact:** [Sam Stevens](mailto:stevens.994@buckeyemail.osu.edu)

## Checkpoints
Expand All @@ -280,7 +280,7 @@ def make_readme(repo: Repo, staged: list[StagedRun]) -> str:

## Inference Instructions

Follow the instructions [here](https://osu-nlp-group.github.io/saev/api/saev/#inference-instructions).
Follow the instructions [here](https://imageomics.github.io/saev/api/saev/#inference-instructions).
"""


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2 changes: 1 addition & 1 deletion docs/api/404.html
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Expand Up @@ -1910,7 +1910,7 @@ <h1>404 - Not found</h1>



<a href="https://github.com/OSU-NLP-Group/saev" target="_blank" rel="noopener" title="github.com" class="md-social__link">
<a href="https://github.com/Imageomics/saev" target="_blank" rel="noopener" title="github.com" class="md-social__link">
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</a>

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<link rel="canonical" href="https://osu-nlp-group.github.io/saev/api/api/colors/">
<link rel="canonical" href="https://imageomics.github.io/saev/api/api/colors/">


<link rel="prev" href="../saev/">
Expand Down Expand Up @@ -2111,7 +2111,7 @@ <h1>saev.colors</h1>



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<a href="https://github.com/Imageomics/saev" target="_blank" rel="noopener" title="github.com" class="md-social__link">
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</a>

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<link rel="canonical" href="https://osu-nlp-group.github.io/saev/api/api/configs/">
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Expand Down Expand Up @@ -2717,7 +2717,7 @@ <h2 id="saev.configs.load_sweep" class="doc doc-heading">



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<link rel="canonical" href="https://osu-nlp-group.github.io/saev/api/api/data/bird_mae/">
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Expand Down Expand Up @@ -3146,7 +3146,7 @@ <h2 id="saev.data.bird_mae.transform" class="doc doc-heading">



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