Lotfollahi-lab

Popular repositories Loading

1. nichecompass nichecompass Public

   End-to-end analysis of spatial multi-omics data

   Python 118 20

2. mintflow mintflow Public template

   Generation of disentangled microenvironment-induced and intrinsic gene expression vectors from spatial transcriptomics data

   Python 27 5

3. tripso tripso Public

   Python 26 1

4. Perturbgen Perturbgen Public

   Python 25 7

5. terra terra Public

   Spatial transcriptomics foundation model based on Graph Transformer and JEPA

   Python 24 1

6. CellDISECT CellDISECT Public

   Fairness in single-cell data

   Python 21 2