mclab

Tools for interfacing with McLab's Sequencing service

Overview

McLab

• Module for interfacing with McLab's excel order form

McOrder

• Module for placing order using google sheets api

McDown

• Module for donwloading data from McLab

process_results

• Module for scanning sequence reads for barcodes

barcode

• Module for scanning for scanning for barcodes

Future

• Move features and issues list to GitHub and out of readme
• Clean up barcode code
  • ISSUE: need to address key errors that occur if a barcode isn't in dictionary
    • FEATURES: add other processing functions (read quality, graphics...?)
• Create general interface to website
  • FEATURE: Make ordering/downloading into selectable options from this interface
  • FEATURE: Check online data files against local data files and download accordingly
  • FEATURE (sheets): create a sheet for sequencing results because we might have re-runs of sequencing
• Batch updates to google sheets to avoid rate limiting issues
• Create GUI interface
  • Allow for specifying different users
  • Allow for clearer ordering
• Allow for full ordering sequence (entry into McLab) from program
  • be really careful with this, actual money LOL