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Welcome to the supercells wiki!

These are the current guides:

1. Installing supercells:

Clone or download the repository and navigate to the package directory, then invoke:

pip install .

(PyPI coming soon..)

2. Running supercells:

Once supercells is installed it is run by invoking:

supercells -i <experiment folder>

Unless specified otherwise it will generate supercells_report.html within the input folder as well as supercells_report folder containing the raw CSV files. To specify an output directory use the -o <output folder> flag