⚡ Bolt: [Optimize Pandas DataFrame Iteration in verify script]#92
⚡ Bolt: [Optimize Pandas DataFrame Iteration in verify script]#92alinelena wants to merge 1 commit into
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Replaced df.iterrows() with df.to_dict('records') to drastically
improve iteration performance over pandas DataFrames in
verify_processed_omol25.py. Downstream .to_dict() calls on rows
were appropriately removed.
Co-authored-by: alinelena <3306823+alinelena@users.noreply.github.com>
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💡 What: Replaced
df.iterrows()withdf.to_dict('records')inverify_processed_omol25.py. Removed redundant.to_dict()methods on row items since they are native python dictionaries rather than pandas Series.🎯 Why: Iterating over large pandas DataFrames via
df.iterrows()is an established anti-pattern known to be extremely slow due to the overhead of creating Series objects for every single row.📊 Impact: Massively reduces runtime overhead for the verification script, especially when validating large datasets where iteration becomes the bottleneck.
🔬 Measurement: Verify by running the verification scripts over a large
.parquetdataset and observing a stark reduction in iteration time compared to the unpatched script. Also verified via existing automated tests intests/test_verify_processed_omol25.pythat core matching logics are unbroken.PR created automatically by Jules for task 15992796889034871065 started by @alinelena