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@fmi-basel

Friedrich Miescher Institute for Biomedical Research

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  1. latent-predictive-learning latent-predictive-learning Public

    Code to accompany our paper "The combination of Hebbian and predictive plasticity learns invariant object representations in deep sensory networks"

    Jupyter Notebook 31 7

  2. stork stork Public

    A differentiable spiking neural network simulator

    Python 25 4

  3. LSTree LSTree Public

    LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.

    Python 20

  4. neural-decoding-RSNN neural-decoding-RSNN Public

    Recurrent spiking neural networks (RSNNs) for decoding of motor signals from cortical spike trains

    Python 14 5

  5. neural-tangent-transfer neural-tangent-transfer Public

    Code accompanying our paper "Finding trainable sparse networks through Neural Tangent Transfer" to be published at ICML-2020.

    Jupyter Notebook 13 8

  6. gliberal-scMultipleX gliberal-scMultipleX Public

    Feature extraction and linking of multiplexing data.

    Python 13 2

Repositories

Showing 10 of 99 repositories
  • compbio-nomeR Public
    fmi-basel/compbio-nomeR’s past year of commit activity
    C++ 0 0 0 0 Updated Apr 19, 2026
  • gbuehler-MiniChip Public

    small collection of R functions for ChIPseq analysis

    fmi-basel/gbuehler-MiniChip’s past year of commit activity
    HTML 3 1 0 0 Updated Apr 17, 2026
  • labbook-explog-fmi Public

    Obsidian plugin

    fmi-basel/labbook-explog-fmi’s past year of commit activity
    TypeScript 0 0 0 0 Updated Apr 16, 2026
  • CaImagingTest Public
    fmi-basel/CaImagingTest’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 15, 2026
  • fmi-basel/balance-controlled-plasticity’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Apr 9, 2026
  • faim-robocopy Public

    A python-based UI for robocopy

    fmi-basel/faim-robocopy’s past year of commit activity
    Python 4 MIT 0 6 1 Updated Apr 6, 2026
  • FMI_H3.4 Public

    Scripts used for the H3.4 manuscript

    fmi-basel/FMI_H3.4’s past year of commit activity
    C 0 0 1 0 Updated Mar 24, 2026
  • sam_trainer Public

    A small package for augmenting images and training micro-sam models

    fmi-basel/sam_trainer’s past year of commit activity
    Python 0 0 0 0 Updated Mar 24, 2026
  • Dreamer-CDP Public Forked from danijar/dreamerv3
    fmi-basel/Dreamer-CDP’s past year of commit activity
    Python 0 MIT 519 0 0 Updated Mar 24, 2026
  • ggrossha_SWI Public template
    fmi-basel/ggrossha_SWI’s past year of commit activity
    Python 0 BSD-3-Clause 0 18 1 Updated Mar 19, 2026

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