bug

[jlac]

I am getting the following error, and am unclear what might be causing it:

/data/CCBR_Pipeliner/db/PipeDB/bin/SupportMixDistribution/Application/SupportMix -s test_SupportMix.out -p afr,eur,eas,sas,amr afr_1k_genomes.tped eur_1k_genomes.tped eas_1k_genomes.tped sas_1k_genomes.tped amr_1k_genomes.tped family1_phased.tped
Traceback (most recent call last):
File "/usr/local/python26/lib/python2.6/site-packages/cx_Freeze/initscripts/Console.py", line 27, in
File "SupportMix", line 339, in

File "/root/SM/supportConfig.py", line 391, in getParameters
File "/root/SM/supportConfig.py", line 96, in determineAllChromosomes
File "/root/SM/fileReader.py", line 11, in openfile
IOError: [Errno 2] No such file or directory: 'afr,eur,eas,sas,amr'
[lackjb@cn3162 wgs_pipeline]$ /data/CCBR_Pipeliner/db/PipeDB/bin/SupportMixDistribution/Application/SupportMix -s test_SupportMix.out -p --labels afr,eur,eas,sas,amr afr_1k_genomes.tped eur_1k_genomes.tped eas_1k_genomes.tped sas_1k_genomes.tped amr_1k_genomes.tped family1_phased.tped
Traceback (most recent call last):
File "/usr/local/python26/lib/python2.6/site-packages/cx_Freeze/initscripts/Console.py", line 27, in
File "SupportMix", line 344, in

File "SupportMix", line 344, in

File "SupportMix", line 103, in runSVM

File "/root/SM/fileReader.py", line 110, in concurrentFileReader
IndexError: pop from an empty deque

Any idea what is going on?

Thanks in advance for your help!

Justin