Would be great to have a annotation agat comparison in the tree

[chriswyatt1]

Description of feature

With AGAT it labels genes based on the gff file, into mRNA, transcripts, sncRNAs, etc.

It would be great in the tree to show this partition (in a pie chart or similar), as gffs can vary widely across labs, and these distinctions are important.

Also, in the tree, we could include some of the main stats of the mRNA feature (normally the one containing equivalent coding "genes", but in some gffs it is called "transcripts"

Feature type: mRNA
Mean length of gene
Number of genes
Single exon genes
Number of transcripts per gene

This can be messy, as annotations vary widely, but its important when comparing genomes to see this annotation difference.

[chriswyatt1]

For the pie of annotation types.
Need, transcript, mRNA, lncRNA and the rest (other)

[chriswyatt1]

This would be great for release v2

[chriswyatt1]

And into the report