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Populate modelCIF metrics classes #578

Description

@keiran-rowell-unsw

Description of feature

ModelCIF supports most of the metrics that proteinfold currently has, but not IpSAE at the moment:

qa_metric.MetricType

people can define their own derived metrics class

...a custom type can also be declared by deriving from this class and providing a docstring to describe the metric type:
class MPQSMetricType(modelcif.qa_metric.MetricType):
     "composite score, values >1.1 are reliable"

This can be used to handle the metrics .tsvs generated in proteinfold as of v2.0

Start by by working through the standard ones ipSAE is being added in #592

Progress

  • PLDDT
  • MSA
  • pTM
  • iPTM
  • PAE (class modelcif.associated.QAMetricsFile)
  • PAE (embedded)

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