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    43 repositories

    • service-data-sharing-manager

      Public
      Data Sharing Orchestration Service
      Python
      •
      MIT License
      •0•0•8•3•Updated Oct 1, 2026Oct 1, 2026

    • service-metadata-manager

      Public
      Python
      •
      MIT License
      •0•0•2•0•Updated Oct 1, 2026Oct 1, 2026

    • orca-ui

      Public
      TypeScript
      •
      MIT License
      •0•1•25•0•Updated Oct 1, 2026Oct 1, 2026

    • orca-ui-v2

      Public
      Temporary Repo for Orcabus LIMS Web UI v2
      TypeScript
      •
      MIT License
      •0•0•1•0•Updated Oct 1, 2026Oct 1, 2026

    • service-sequence-run-manager

      Public
      Sequence Run Manager Stack
      Python
      •
      MIT License
      •0•0•4•0•Updated Oct 1, 2026Oct 1, 2026

    • service-pieriandx-tso500-ctdna-pipeline-manager

      Public
      PierianDx Microservice - create / monitor TSO500 ctDNA PierianDx jobs
      Python
      •
      MIT License
      •0•0•11•1•Updated Oct 1, 2026Oct 1, 2026

    • service-fastq-sync-manager

      Public
      Holds Step functions tasks until fastq requirements are met
      TypeScript
      •
      MIT License
      •0•0•8•2•Updated Oct 1, 2026Oct 1, 2026

    • service-oncoanalyser-wgts-rna-pipeline-manager

      Public
      Oncoanalyser WGTS RNA Pipeline Orchestration Service
      TypeScript
      •
      MIT License
      •0•0•1•1•Updated Oct 1, 2026Oct 1, 2026

    • service-icav2-wes-manager

      Public
      Run analyses through ICAv2-backed WES interface
      Python
      •
      MIT License
      •0•0•10•1•Updated Oct 1, 2026Oct 1, 2026

    • service-icav2-data-copy-manager

      Public
      Service for copying data from one ICAv2 destination to another
      Python
      •
      MIT License
      •0•0•5•1•Updated Oct 1, 2026Oct 1, 2026

    • service-sash-pipeline-manager

      Public
      Run Sash through Nextflow on ICAv2
      Python
      •
      MIT License
      •0•0•3•2•Updated Oct 1, 2026Oct 1, 2026

    • service-bssh-to-aws-s3-copy-manager

      Public
      Copy primary data from our BSSH Project to our AWS S3 Pipeline Cache Bucket
      TypeScript
      •
      MIT License
      •0•0•2•1•Updated Oct 1, 2026Oct 1, 2026

    • service-dragen-wgts-dna-pipeline-manager

      Public
      The dragen wgts dna pipeline manager
      Python
      •
      MIT License
      •1•0•2•4•Updated Oct 1, 2026Oct 1, 2026

    • service-oncoanalyser-wgts-both-pipeline-manager

      Public
      Run the oncoanalyser-wgts-both pipeline from Oncoanalyser DNA + RNA inputs
      Python
      •
      MIT License
      •0•0•2•1•Updated Oct 1, 2026Oct 1, 2026

    • service-bclconvert-interop-qc-pipeline-manager

      Public
      BCLConvert InterOp QC Pipeline Manager
      Python
      •
      MIT License
      •0•0•3•1•Updated Oct 1, 2026Oct 1, 2026

    • service-dragen-tso500-ctdna-pipeline-manager

      Public
      Run the dragen TSO500 ctDNA v2.X NF pipeline through ICAv2
      Python
      •
      MIT License
      •0•0•1•1•Updated Oct 1, 2026Oct 1, 2026

    • service-oncoanalyser-wgts-dna-pipeline-manager

      Public
      Run oncoanalyser through the OrcaBus orchestration system
      Python
      •
      MIT License
      •0•1•1•1•Updated Oct 1, 2026Oct 1, 2026

    • service-analysis-glue

      Public
      The 'glue-code' for generating analyses post primary-data creation
      TypeScript
      •
      MIT License
      •0•0•5•1•Updated Oct 1, 2026Oct 1, 2026

    • service-deploy-status-manager

      Public
      Provides realtime information for each microservice's CloudFormation deployment in dev/stg/prod envs
      TypeScript
      •
      MIT License
      •0•0•4•1•Updated Oct 1, 2026Oct 1, 2026

    • service-rnasum-pipeline-manager

      Public
      Run RNASum via the OrcaBus
      Python
      •
      MIT License
      •0•0•2•1•Updated Oct 1, 2026Oct 1, 2026

    • service-dragen-wgts-rna-pipeline-manager

      Public
      Dragen RNA Pipeline Orchestration through ICAv2
      Python
      •
      MIT License
      •0•0•5•1•Updated Oct 1, 2026Oct 1, 2026

    • service-arriba-wgts-rna-pipeline-manager

      Public
      Arriba WGTS RNA Pipeline Orchestration Service
      Python
      •
      MIT License
      •0•0•2•1•Updated Oct 1, 2026Oct 1, 2026

    • service-fastq-glue

      Public
      Fastq Glue Service to Register new Fastq Set / Fastq List Row IDs from new Instrument Run Ids
      Python
      •
      MIT License
      •0•0•1•2•Updated Sep 29, 2026Sep 29, 2026

    • service-fastq-manager

      Public
      Fastq management service
      Python
      •
      MIT License
      •0•0•6•0•Updated Sep 29, 2026Sep 29, 2026

    • service-case-manager

      Public
      Python
      •
      MIT License
      •0•0•8•1•Updated Sep 28, 2026Sep 28, 2026

    • service-fastq-decompression-manager

      Public
      Decompress Fastq Files from ORA to GZIP with serverless compute
      TypeScript
      •
      MIT License
      •0•0•4•0•Updated Sep 21, 2026Sep 21, 2026

    • platform-cdk-constructs

      Public
      Python
      •
      MIT License
      •0•0•5•3•Updated Sep 18, 2026Sep 18, 2026

    • service-filemanager

      Public
      The filemanager tracks object state in S3
      Rust
      •
      MIT License
      •0•2•23•1•Updated Sep 7, 2026Sep 7, 2026

    • service-workflow-manager

      Public
      Workflow Manager Stack
      Python
      •
      MIT License
      •0•0•11•1•Updated Sep 1, 2026Sep 1, 2026

    • service-shared-resources

      Public
      TypeScript
      •
      MIT License
      •0•0•3•1•Updated Aug 13, 2026Aug 13, 2026
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