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@TheRoddyWMS The Roddy Workflow Management System

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    7 repositories

    • Roddy

      Public
      The Roddy workflow development and management system.
      workflowbioinformaticspipeline
      workflowbioinformaticspipelineworkflow-enginelsfscientific-workflowsworkflow-managementhpc-applicationspbsgrid-engine
      Groovy
      •
      MIT License
      •3•8•76•0•Updated Jul 28, 2026Jul 28, 2026

    • BatchEuphoria

      Public
      A library to access different kinds of cluster backends
      clusterjob-schedulersge
      clusterjob-schedulersgelsfbatchpbsroddy
      Groovy
      •
      MIT License
      •5•4•24•2•Updated Jul 14, 2026Jul 14, 2026

    • RoddyToolLib

      Public
      Tool library used in BatchEuphoria and Roddy
      Groovy
      •
      MIT License
      •2•0•1•0•Updated Jul 14, 2026Jul 14, 2026

    • Roddy-Default-Plugin

      Public
      Roddies Default Plugin (Base for all Roddy plugins)
      roddy
      roddy
      Shell
      •1•0•2•0•Updated Jun 18, 2024Jun 18, 2024

    • BamToFastqPlugin

      Public archive
      This Roddy plugin contains a basic bam to fastq workflow using Picard and Samtools.
      workflowpicardbam-files
      workflowpicardbam-filesbamfastqbiobambam2roddy
      Shell
      •
      MIT License
      •0•1•1•0•Updated Nov 18, 2020Nov 18, 2020

    • Roddy-Workflow-Deployment

      Public
      A repository dedicated to deploy Roddy workflows via e.g. Installer scripts or Docker containers.
      Shell
      •
      MIT License
      •0•0•0•5•Updated Jun 7, 2019Jun 7, 2019

    • Roddy-Base-Plugin

      Public
      Roddy Base Plugin (used in all plugins)
      roddy
      roddy
      Java
      •1•0•0•0•Updated Jul 25, 2018Jul 25, 2018
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