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  1. hmftools hmftools Public

    Various algorithms for analysing genomics data

    Java 292 71

  2. pipeline5 pipeline5 Public

    Java 28 3

  3. testdata testdata Public

    Small datasets for testing purpose (FASTQ, BAM)

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  4. pipeline-perl pipeline-perl Public archive

    Pipeline of tools to process raw fastq data and produce meaningful genomic data

    Perl 14 3

  5. platinum platinum Public

    Run multiple Pipeline5 instances at once

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  6. actin actin Public

    Algorithmic Cancer Treatment Initiative

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  • hmftools Public

    Various algorithms for analysing genomics data

    hartwigmedical/hmftools's past year of commit activity
    Java 292 GPL-3.0 71 50 19 Updated Sep 19, 2026
  • actin Public

    Algorithmic Cancer Treatment Initiative

    hartwigmedical/actin's past year of commit activity
    Kotlin 5 GPL-3.0 1 0 7 Updated Sep 15, 2026
  • documentation Public

    Welcome to Hartwig Medical Foundation’s documentation site!

    hartwigmedical/documentation's past year of commit activity
    HTML 4 2 0 0 Updated Sep 11, 2026
  • pipeline5 Public
    hartwigmedical/pipeline5's past year of commit activity
    Java 28 GPL-3.0 3 0 4 Updated Sep 11, 2026
  • serve Public

    SERVE and dependencies

    hartwigmedical/serve's past year of commit activity
    Java 1 GPL-3.0 0 0 0 Updated Sep 9, 2026
  • hartwigmedical/infra-e2e-explorer's past year of commit activity
    TypeScript 0 0 0 0 Updated Aug 31, 2026
  • trial-curator Public
    hartwigmedical/trial-curator's past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Aug 26, 2026
  • dndscv Public Forked from im3sanger/dndscv

    dN/dS methods to quantify selection in cancer and somatic evolution

    hartwigmedical/dndscv's past year of commit activity
    HTML 0 GPL-3.0 53 0 0 Updated Jul 12, 2026
  • mhc-pangenome Public

    Code to run pangenome mapping of short reads to MHC locus

    hartwigmedical/mhc-pangenome's past year of commit activity
    Nextflow 1 0 0 0 Updated May 11, 2026
  • wgs-clinical-utility-solid-cancers Public

    Study by AVL/NKI on the utility of WGS for Routine Solid Cancer Diagnostics

    hartwigmedical/wgs-clinical-utility-solid-cancers's past year of commit activity
    R 1 GPL-3.0 1 0 0 Updated Apr 22, 2026

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